Browsing by Author "Walker, Alan W"
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Item ARK : Aggregation of Reads by K-Means for Estimation of Bacterial Community Composition(2015-10-23) Koslicki, David; Chatterjee, Saikat; Shahrivar, Damon; Walker, Alan W; Francis, Suzanna C; Fraser, Louise J; Vehkaperä, Mikko; Lan, Yueheng; Corander, Jukka; University of Aberdeen.Rowett InstituteItem Bayesian estimation of bacterial community composition from 454 sequencing data(2012-07) Cheng, Lu; Walker, Alan W; Corander, Jukka; University of Aberdeen.Rowett InstituteItem A common genomic framework for a diverse assembly of plasmids in the symbiotic nitrogen fixing bacteria(2008-07-02) Crossman, Lisa C; Castillo-Ramírez, Santiago; McAnnula, Craig; Lozano, Luis; Vernikos, Georgios S; Acosta, José L; Ghazoui, Zara F; Hernández-González, Ismael; Meakin, Georgina; Walker, Alan W; Hynes, Michael F; Young, J Peter W; Downie, J Allan; Romero, David; Johnston, Andrew W B; Dávila, Guillermo; Parkhill, Julian; González, Víctor; University of Aberdeen.Rowett InstituteItem Comparing the microbiota of the cystic fibrosis lung and human gut(2010-05-01) Rogers, Geraint B; Carroll, Mary P; Hoffman, Lukas R; Walker, Alan W; Fine, David A; Bruce, Kenneth D; University of Aberdeen.Rowett InstituteItem Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition(2014-06-27) Pop, Mihai; Walker, Alan W; Paulson, Joseph; Lindsay, Brianna; Antonio, Martin; Hossain, M Anowar; Oundo, Joseph; Tamboura, Boubou; Mai, Volker; Astrovskaya, Irina; Bravo, Hector; Rance, Richard; Stares, Mark; Levine, Myron M; Panchalingam, Sandra; Kotloff, Karen; Ikumapayi, Usman N; Ebruke, Chinelo; Adeyemi, Mitchell; Ahmed, Dilruba; Ahmed, Firoz; Alam, Meer; Amin, Ruhul; Siddiqui, Sabbir; Ochieng, John B; Ouma, Emmanuel; Juma, Jane; Mailu, Euince; Omore, Richard; Morris, J Glenn; Breiman, Robert F; Saha, Debasish; Parkhill, Julian; Nataro, James P; Stine, O Colin; University of Aberdeen.Rowett InstituteItem A grape seed and bilberry extract reduces blood pressure in individuals at risk of developing type 2 diabetes : the PRECISE study, a double-blind placebo-controlled cross-over intervention study(2023-06-07) Grohmann, Teresa; Walker, Alan W; Russell, Wendy R; Hoggard, Nigel; Zhang, Xuguang; Horgan, Graham; de Roos, Baukje; University of Aberdeen.Rowett InstituteItem High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in inflammatory bowel disease(2011-01-10) Walker, Alan W; Sanderson, Jeremy D; Churcher, Carol; Parkes, Gareth C; Hudspith, Barry N; Rayment, Neil; Brostoff, Jonathan; Parkhill, Julian; Dougan, Gordon; Petrovska, Liljana; University of Aberdeen.Rowett InstituteItem Impact of changes at the Candida albicans cell surface upon immunogenicity and colonisation in the gastrointestinal tract(2022-12-01) Avelar, Gabriela M; Dambuza, Ivy M; Ricci, Liviana; Yuecel, Raif; Mackenzie, Kevin; Childers, Delma S; Bain, Judith M; Pradhan, Arnab; Larcombe, Daniel E; Netea, Mihai G; Erwig, Lars P; Brown, Gordon D; Duncan, Sylvia H; Gow, Neil A R; Walker, Alan W; Brown, Alistair J P; University of Aberdeen.Medical Sciences; University of Aberdeen.Applied Medicine; University of Aberdeen.Medicine, Medical Sciences & Nutrition; University of Aberdeen.Institute of Medical Sciences; University of Aberdeen.Rowett Institute; University of Aberdeen.Gut HealthItem The impact of different DNA extraction kits and laboratories upon the assessment of human gut microbiota composition by 16S rRNA gene sequencing(2014-02-24) Kennedy, Nicholas A; Walker, Alan W; Berry, Susan H; Duncan, Sylvia H; Farquarson, Freda M; Louis, Petra; Thomson, John M; Satsangi, Jack; Flint, Harry James; Parkhill, Julian; Lees, Charlie W; Hold, Georgina L; UK IBD Genetics Consortium; University of Aberdeen.Rowett Institute; University of Aberdeen.Applied Medicine; University of Aberdeen.University of AberdeenItem The Impact of NOD2 Variants on Fecal Microbiota in Crohn’s Disease and Controls Without Gastrointestinal Disease(2018-03) Kennedy, Nicholas A; Lamb, Christopher A; Berry, Susan H; Walker, Alan W; Mansfield, John; Parkes, Miles; Simpkins, Rachel; Tremelling, Mark; Nutland, Sarah; UK IBD Genetics Consortium; Parkhill, Julian; Probert, Chris; Hold, Georgina L; Lees, Charlie W.; University of Aberdeen.Applied Medicine; University of Aberdeen.Rowett Institute; University of Aberdeen.Medical SciencesItem The impact of the Fungus-Host-Microbiota interplay upon Candida albicans infections : current knowledge and new perspectives(2021-05) d'Enfert, Christophe; Kaune, Ann-Kristin; Rey Alaban, Leovigildo; Chakraborty, Sayoni; Cole, Nathaniel; Delavy, Margot; Kosmala, Daria; Marsaux, Benoît; FróisMartins, Ricardo; Morelli, Moran; Rosati, Diletta; Valentine, Marisa; Xie, Zixuan; Emritloll, Yoan; Warn, Peter A; Bequet, Frédéric; Bougnoux, Marie-Elisabeth; Bornes, Stephanie; Gresnigt , Mark S.; Hube, Bernard; Jacobsen, lse D.; Legrand, Melanie; Leibundgut-Landmann, Salomé; Manichanh, Chaysavanh; Munro, Carol; Netea, Mihai G.; Queiroz, Karla; Roget, Karine; Thomas, Vincent; Thora, Claudia; Van den Abbeele, Pieter; Walker, Alan W; Brown, Alistair J.P.; University of Aberdeen.Institute of Medical Sciences; University of Aberdeen.Medical Sciences; University of Aberdeen.Rowett InstituteItem Implications of multiple freeze-thawing on respiratory samples for culture-independent analyses(2015-07) Cuthbertson, Leah; Rogers, Geraint B; Walker, Alan W; Oliver, Anna; Hoffman, Lucas R; Carroll, Mary P; Parkhill, Julian; Bruce, Kenneth D; van der Gast, Christopher J; University of Aberdeen.Rowett InstituteItem Interleukin 6 Increases Production of Cytokines by Colonic Innate Lymphoid Cells in Mice and Patients With Chronic Intestinal Inflammation(2015-08) Powell, Nick; Lo, Jonathan W; Biancheri, Paolo; Vossenkämper, Anna; Pantazi, Eirini; Walker, Alan W; Stolarczyk, Emilie; Ammoscato, Francesca; Goldberg, Rimma; Scott, Paul; Canavan, James B; Perucha, Esperanza; Garrido-Mesa, Natividad; Irving, Peter M; Sanderson, Jeremy D; Hayee, Bu; Howard, Jane K; Parkhill, Julian; MacDonald, Thomas T; Lord, Graham M; University of Aberdeen.Rowett InstituteItem The Intestinal Microbiota Contributes to the Ability of Helminths to Modulate Allergic Inflammation(2015-11-17) Zaiss, Mario M; Rapin, Alexis; Lebon, Luc; Dubey, Lalit Kumar; Mosconi, Ilaria; Sarter, Kerstin; Piersigilli, Alessandra; Menin, Laure; Walker, Alan W; Rougemont, Jacques; Paerewijck, Oonagh; Geldhof, Peter; McCoy, Kathleen D; Macpherson, Andrew J; Croese, John; Giacomin, Paul R; Loukas, Alex; Junt, Tobias; Marsland, Benjamin J; Harris, Nicola L; University of Aberdeen.Rowett InstituteItem Lung function and microbiota diversity in cystic fibrosis(2020-04-02) Cuthbertson, Leah; Walker, Alan W; Oliver, Anna E; Rogers, Geraint B; Rivett, Damian W; Hampton, Thomas H; Ashare, Alix; Elborn, Stuart; De Soyza, Anthony; Carroll, Mary; Hoffman, Lucas R; Lanyon, Clare; Moskowitz, Samuel; O'Toole, George; Parkhill, Julian; Planet, Paul J; Teneback, Charlotte; Tunney, Michael; Zuckerman, Jonathan; Bruce, Kenneth D; van der Gast, Chris; University of Aberdeen.Rowett InstituteItem Microbiota that affect risk for shigellosis in children in low-income countries(2015-02) Lindsay, Brianna; Oundo, Joe; Hossain, M Anowar; Antonio, Martin; Tamboura, Boubou; Walker, Alan W; Paulson, Joseph N; Parkhill, Julian; Omore, Richard; Faruque, Abu S G; Das, Suman Kumar; Ikumapayi, Usman N; Adeyemi, Mitchell; Sanogo, Doh; Saha, Debasish; Sow, Samba; Farag, Tamer H; Nasrin, Dilruba; Li, Shan; Panchalingam, Sandra; Levine, Myron M; Kotloff, Karen; Magder, Laurence S; Hungerford, Laura; Sommerfelt, Halvor; Pop, Mihai; Nataro, James P; Stine, O Colin; University of Aberdeen.Rowett InstituteItem Modulating the early-life gut microbiota using pro-, pre-, and synbiotics to improve gut health, child development, and growth(2024-02) Momo Kadia, Benjamin; Otiti, Mary Iwaret; Ramsteijn, Anouschka S; Sow, Doudou; Faye, Babacar; Heffernan, Claire; Hall, Lindsay J; Webster, Joanne P; Walker, Alan W; Allen, Stephen; University of Aberdeen.Rowett InstituteItem Molecular diversity, cultivation, and improved detection by fluorescent in situ hybridization of a dominant group of human gut bacteria related to Roseburia spp. or Eubacterium rectale(2006-09) Aminov, Rustam I; Walker, Alan W; Duncan, Sylvia H; Harmsen, Hermie J M; Welling, Gjalt W; Flint, Harry James; University of Aberdeen, Medicine, Medical Sciences & Nutrition, Gut Health; University of Aberdeen, School of Medical Sciences; University of Aberdeen, Medicine, Medical Sciences & Nutrition, RINHItem Molecular diversity, cultivation, and improved detection by fluorescent in situ hybridization of a dominant group of human gut bacteria related to Roseburia spp. or Eubacterium rectale(2006-09) Aminov, Rustam I; Walker, Alan W; Duncan, Sylvia H; Harmsen, Hermie J M; Welling, Gjalt W; Flint, Harry James; University of Aberdeen.Rowett InstituteItem Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities(2011-05) van der Gast, Christopher J; Walker, Alan W; Stressmann, Franziska A; Rogers, Geraint B; Scott, Paul; Daniels, Thomas W; Carroll, Mary P; Parkhill, Julian; Bruce, Kenneth D; University of Aberdeen.Rowett Institute