This is the peer reviewed version of the following article: Brown, B. R., Lee, E. J., Snow, P. E., Vance, E. E., Iwakura, Y., Ohno, N., Miura, N., Lin, X., Brown, G. D., Wells, C. A., Smith, J. R., Caspi, R. R. and Rosenzweig, H. L. (2017), Fungal-derived cues promote ocular autoimmunity through a Dectin-2/Card9-mediated mechanism. Clin Exp Immunol, 190: 293–303., which has been published in final form at DOI: 10.1111/cei.13021. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Self-Archiving.