| dc.contributor.author | Smith, Rebecca Louise | |
| dc.contributor.author | Glendinning, Laura | |
| dc.contributor.author | Walker, Alan | |
| dc.contributor.author | Watson, Mick | |
| dc.date.accessioned | 2022-10-02T20:34:00Z | |
| dc.date.available | 2022-10-02T20:34:00Z | |
| dc.date.issued | 2022-11-18 | |
| dc.identifier.citation | Smith , R L , Glendinning , L , Walker , A & Watson , M 2022 , ' Investigating the impact of database choice on the accuracy of metagenomic read classification for the rumen microbiome ' , Animal Microbiome , vol. 4 , 57 . https://doi.org/10.1186/s42523-022-00207-7 | en |
| dc.identifier.issn | 2524-4671 | |
| dc.identifier.other | PURE: 219633981 | |
| dc.identifier.other | PURE UUID: da67e897-eead-416f-9d7b-12b214517868 | |
| dc.identifier.other | ORCID: /0000-0001-5099-8495/work/123848333 | |
| dc.identifier.other | PubMed: 36401288 | |
| dc.identifier.uri | https://hdl.handle.net/2164/19264 | |
| dc.description | The Roslin Institute forms part of the Royal (Dick) School of Veterinary Studies, University of Edinburgh. This project was supported by the Biotechnology and Biological Sciences Research Council (BBSRC; BB/S006680/1, BB/R015023/1), including institute strategic program grant BBS/E/D/30002276. R.H.S. is supported by an EASTBIO studentship funded by BBSRC (BB/M010996/1). A.W.W. and the Rowett Institute receive core financial support from the Scottish Government Rural and Environmental Sciences and Analytical Services (SG-RESAS). We would like to thank all of those who were involved in creating and publicly sharing both the Hungate Collection data and the RUG data. | en |
| dc.language.iso | eng | |
| dc.relation.ispartof | Animal Microbiome | en |
| dc.rights | © The Author(s) 2022. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. | en |
| dc.subject | Metagenome-assembled genomes | en |
| dc.subject | Metagenome | en |
| dc.subject | Rumen | en |
| dc.subject | Microbiome | en |
| dc.subject | Reference databases | en |
| dc.subject | Read classification | en |
| dc.subject | Taxonomy | en |
| dc.subject | R Medicine | en |
| dc.subject | Biotechnology and Biological Sciences Research Council (BBSRC) | en |
| dc.subject | BB/S006680/1 | en |
| dc.subject | BB/R015023/1 | en |
| dc.subject | BBS/E/D/30002276 | en |
| dc.subject | BB/M010996/1 | en |
| dc.subject | Rural and Environmental Science and Analytical Services (RESAS) | en |
| dc.subject.lcc | R | en |
| dc.title | Investigating the impact of database choice on the accuracy of metagenomic read classification for the rumen microbiome | en |
| dc.type | Journal article | en |
| dc.contributor.institution | University of Aberdeen.Rowett Institute | en |
| dc.description.status | Peer reviewed | en |
| dc.description.version | Publisher PDF | en |
| dc.identifier.doi | https://doi.org/10.1186/s42523-022-00207-7 | |
| dc.identifier.vol | 4 | en |
