Show simple item record

dc.contributor.authorSmith, Rebecca Louise
dc.contributor.authorGlendinning, Laura
dc.contributor.authorWalker, Alan
dc.contributor.authorWatson, Mick
dc.date.accessioned2022-10-02T20:34:00Z
dc.date.available2022-10-02T20:34:00Z
dc.date.issued2022-11-18
dc.identifier.citationSmith , R L , Glendinning , L , Walker , A & Watson , M 2022 , ' Investigating the impact of database choice on the accuracy of metagenomic read classification for the rumen microbiome ' , Animal Microbiome , vol. 4 , 57 . https://doi.org/10.1186/s42523-022-00207-7en
dc.identifier.issn2524-4671
dc.identifier.otherPURE: 219633981
dc.identifier.otherPURE UUID: da67e897-eead-416f-9d7b-12b214517868
dc.identifier.otherORCID: /0000-0001-5099-8495/work/123848333
dc.identifier.otherPubMed: 36401288
dc.identifier.urihttps://hdl.handle.net/2164/19264
dc.descriptionThe Roslin Institute forms part of the Royal (Dick) School of Veterinary Studies, University of Edinburgh. This project was supported by the Biotechnology and Biological Sciences Research Council (BBSRC; BB/S006680/1, BB/R015023/1), including institute strategic program grant BBS/E/D/30002276. R.H.S. is supported by an EASTBIO studentship funded by BBSRC (BB/M010996/1). A.W.W. and the Rowett Institute receive core financial support from the Scottish Government Rural and Environmental Sciences and Analytical Services (SG-RESAS). We would like to thank all of those who were involved in creating and publicly sharing both the Hungate Collection data and the RUG data.en
dc.language.isoeng
dc.relation.ispartofAnimal Microbiomeen
dc.rights© The Author(s) 2022. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.en
dc.subjectMetagenome-assembled genomesen
dc.subjectMetagenomeen
dc.subjectRumenen
dc.subjectMicrobiomeen
dc.subjectReference databasesen
dc.subjectRead classificationen
dc.subjectTaxonomyen
dc.subjectR Medicineen
dc.subjectBiotechnology and Biological Sciences Research Council (BBSRC)en
dc.subjectBB/S006680/1en
dc.subjectBB/R015023/1en
dc.subjectBBS/E/D/30002276en
dc.subjectBB/M010996/1en
dc.subjectRural and Environmental Science and Analytical Services (RESAS)en
dc.subject.lccRen
dc.titleInvestigating the impact of database choice on the accuracy of metagenomic read classification for the rumen microbiomeen
dc.typeJournal articleen
dc.contributor.institutionUniversity of Aberdeen.Rowett Instituteen
dc.description.statusPeer revieweden
dc.description.versionPublisher PDFen
dc.identifier.doihttps://doi.org/10.1186/s42523-022-00207-7
dc.identifier.vol4en


Files in this item

Thumbnail

This item appears in the following Collection(s)

Show simple item record