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Comparison of microbial signatures between paired faecal and rectal biopsy samples from healthy volunteers using next-generation sequencing and culturomics

dc.contributor.authorMukhopadhya, Indrani
dc.contributor.authorMartin, Jennifer C.
dc.contributor.authorShaw, Sophie
dc.contributor.authorMcKinley, Aileen J.
dc.contributor.authorGratz, Silvia W.
dc.contributor.authorScott, Karen P.
dc.date.accessioned2022-10-14T14:52:00Z
dc.date.available2022-10-14T14:52:00Z
dc.date.issued2022-10-14
dc.identifier.citationMukhopadhya , I , Martin , J C , Shaw , S , McKinley , A J , Gratz , S W & Scott , K P 2022 , ' Comparison of microbial signatures between paired faecal and rectal biopsy samples from healthy volunteers using next-generation sequencing and culturomics ' , Microbiome , vol. 10 , no. 1 , 171 . https://doi.org/10.1186/s40168-022-01354-4en
dc.identifier.issn2049-2618
dc.identifier.otherPURE: 219977093
dc.identifier.otherPURE UUID: d61ab14f-eba8-4a60-b33d-94034d2c04f8
dc.identifier.otherunpaywall: 10.1186/s40168-022-01354-4
dc.identifier.otherORCID: /0000-0003-2577-518X/work/121059789
dc.identifier.otherScopus: 85139885730
dc.identifier.otherPubMed: 36242064
dc.identifier.otherWOS: 000873817000003
dc.identifier.urihttps://hdl.handle.net/2164/19378
dc.descriptionAcknowledgements We are indebted to our volunteers for providing the faecal and biopsy samples without which this study would not have been possible. We thank the members of the Rowett Gut Health research team for discussions and advice. The authors thank the Centre for Genome Enabled Biology and Medicine for Illumina sequencing and useful discussions. Funding This work was supported by funding from Probi AB (Grant Ref: RG14104). The Rowett Institute (University of Aberdeen) receives financial support from the Scottish Government Rural and Environmental Sciences and Analytical Services (RESAS).en
dc.format.extent17
dc.language.isoeng
dc.relation.ispartofMicrobiomeen
dc.rightsOpen Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. Ten
dc.subjectFaecal microbiotaen
dc.subjectMucosa-associated microbiotaen
dc.subjectMicrobiome analysisen
dc.subjectNext-generation sequencingen
dc.subjectAnaerobic bacteriaen
dc.subjectCultureen
dc.subjectSCFAen
dc.subjectR Medicineen
dc.subjectRural and Environmental Science and Analytical Services (RESAS)en
dc.subjectOtheren
dc.subjectRG14104en
dc.subjectSupplementary Informationen
dc.subject.lccRen
dc.titleComparison of microbial signatures between paired faecal and rectal biopsy samples from healthy volunteers using next-generation sequencing and culturomicsen
dc.typeJournal articleen
dc.contributor.institutionUniversity of Aberdeen.Rowett Instituteen
dc.description.statusPeer revieweden
dc.description.versionPublisher PDFen
dc.identifier.doihttps://doi.org/10.1186/s40168-022-01354-4
dc.identifier.urlhttp://www.scopus.com/inward/record.url?scp=85139885730&partnerID=8YFLogxKen
dc.identifier.vol10en
dc.identifier.iss1en


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