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Genome-wide reconstruction of rediploidization following autopolyploidization across one hundred million years of salmonid evolution

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dc.contributor.authorGundappa, Manu Kumar
dc.contributor.authorTo, Thu-Hien
dc.contributor.authorGrønvold, Lars
dc.contributor.authorMartin, Samuel A M
dc.contributor.authorLien, Sigbjørn
dc.contributor.authorGeist, Juergen
dc.contributor.authorHazlerigg, David
dc.contributor.authorSandve, Simen R
dc.contributor.authorMacqueen, Daniel J
dc.contributor.institutionUniversity of Aberdeen.Biological Sciencesen
dc.contributor.institutionUniversity of Aberdeen.Scottish Fish Immunology Research Centreen
dc.date.accessioned2022-02-01T11:36:01Z
dc.date.available2022-02-01T11:36:01Z
dc.date.issued2022-01-01
dc.descriptionAcknowledgements: This work was supported by the Biotechnology and Biological Sciences Research Council grant BBS/E/D/10002070 and the Frimedbio program of the Research Council of Norway (grant number 241016). MKG received studentship funding from a University of Aberdeen Elphinstone scholarship with additional support from the Government of Karnataka. We thank Dr Sebastian Beggel, Dr Bernhard C. Stoeckle, Jens-Eike Täuber and Ms Haiyu Ding at the Aquatic Systems Biology Unit, Technical University of Munich for their support in sampling huchen. We thank Dr Torfinn Nome for supporting bioinformatic analyses. We thank Madhusudhan Gundappa (Twitter: @fish_lines) for providing species illustrations in Figure 1. We also thanks Dr Gareth Gillard (Norwegian University of Life Sciences) for support with the RNA-Seq data. The Earlham Institute performed library preparation and sequencing used in the huchen genome assembly.en
dc.description.statusPeer revieweden
dc.format.extent18
dc.format.extent1443059
dc.identifier208493573
dc.identifier1ff27617-afeb-4ff7-aac5-f82308df419f
dc.identifier34718723
dc.identifier85123813058
dc.identifier.citationGundappa, M K, To, T-H, Grønvold, L, Martin, S A M, Lien, S, Geist, J, Hazlerigg, D, Sandve, S R & Macqueen, D J 2022, 'Genome-wide reconstruction of rediploidization following autopolyploidization across one hundred million years of salmonid evolution', Molecular Biology and Evolution, vol. 39, no. 1, msab310. https://doi.org/10.1093/molbev/msab310en
dc.identifier.doi10.1093/molbev/msab310
dc.identifier.iss1en
dc.identifier.issn0737-4038
dc.identifier.otherORCID: /0000-0003-0289-6317/work/154626925
dc.identifier.urihttps://hdl.handle.net/2164/18010
dc.identifier.vol39en
dc.language.isoeng
dc.relation.ispartofMolecular Biology and Evolutionen
dc.subjectwhole genomeen
dc.subjectduplicationen
dc.subjectrediploidizationen
dc.subjectohnlogen
dc.subjectphylogenomicsen
dc.subjectgenome evolutionen
dc.subjectQH301 Biologyen
dc.subjectBiotechnology and Biological Sciences Research Council (BBSRC)en
dc.subjectBBS/E/D/10002070en
dc.subjectSupplementary Dataen
dc.subject.lccQH301en
dc.titleGenome-wide reconstruction of rediploidization following autopolyploidization across one hundred million years of salmonid evolutionen
dc.typeJournal articleen

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