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Whole Genome Sequence of Dermacoccus abyssi MT1.1 Isolated from the Challenger Deep of the Mariana Trench Reveals Phenazine Biosynthesis Locus and Environmental Adaptation Factors

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dc.contributor.authorAbdel-Mageed, Wael M
dc.contributor.authorJuhasz, Bertalan
dc.contributor.authorLehri, Burhan
dc.contributor.authorAlqahtani, Ali S
dc.contributor.authorNouioui, Imen
dc.contributor.authorPech-Puch, Dawrin
dc.contributor.authorTabudravu, Jioji N
dc.contributor.authorGoodfellow, Michael
dc.contributor.authorRodríguez, Jaime
dc.contributor.authorJaspars, Marcel
dc.contributor.authorKarlyshev, Andrey V
dc.contributor.institutionUniversity of Aberdeen.Natural & Computing Sciencesen
dc.contributor.institutionUniversity of Aberdeen.Chemistryen
dc.date.accessioned2020-03-11T09:35:01Z
dc.date.available2020-03-11T09:35:01Z
dc.date.issued2020-02-25
dc.descriptionFunding: This work was supported by Researchers Supporting Project number (RSP-2019/132), King Saud University, Riyadh, Saudi Arabia. Acknowledgements: A.S.A. is thankful to the Researchers Supporting Project number (RSP-2019/132), King Saud University, Riyadh, Saudi Arabia.The authors are also indebted to Wasu Pathom-Aree (Chiang Mai University, Thailand) who isolated the strain. Conflicts of Interest: The authors declare that they don’t have any conflicts of interest. Author Contributions: W.M.A.-M., B.L. and A.V.K. were responsible for the whole genome sequencing and bioinformatic analyses; W.M.A.-M. and A.S.A. analyzed the sequence data for protein coding genes and their functions; B.J. and M.J. were responsible for cultivating the organism and for the isolation and identification of dermacozine M; I.N. and M.G. isolated and purified the DNA for whole genome sequencing and was responsible for the systematics; D.P.-P. and J.R. did the computational calculations; J.N.T. did the 13C chemical shift simulation and W.M.A.-M., B.J., B.L., A.S.A., M.G., D.P.-P., M.G., M.J. and A.V.K. prepared the manuscript; all of authors read and apen
dc.description.statusPeer revieweden
dc.format.extent18
dc.format.extent2733499
dc.identifier158824783
dc.identifierc6516c93-3464-44c1-8168-a3050ee48575
dc.identifier32106586
dc.identifier85081598373
dc.identifier000524256300021
dc.identifier.citationAbdel-Mageed, W M, Juhasz, B, Lehri, B, Alqahtani, A S, Nouioui, I, Pech-Puch, D, Tabudravu, J N, Goodfellow, M, Rodríguez, J, Jaspars, M & Karlyshev, A V 2020, 'Whole Genome Sequence of Dermacoccus abyssi MT1.1 Isolated from the Challenger Deep of the Mariana Trench Reveals Phenazine Biosynthesis Locus and Environmental Adaptation Factors', Marine Drugs, vol. 18, no. 3, 131. https://doi.org/10.3390/md18030131en
dc.identifier.doi10.3390/md18030131
dc.identifier.iss3en
dc.identifier.issn1660-3397
dc.identifier.otherORCID: /0000-0002-2426-6028/work/163664418
dc.identifier.urihttps://hdl.handle.net/2164/13857
dc.identifier.urlhttp://www.scopus.com/inward/record.url?scp=85081598373&partnerID=8YFLogxKen
dc.identifier.vol18en
dc.language.isoeng
dc.relation.ispartofMarine Drugsen
dc.subjectMariana Trenchen
dc.subjectDermacoccus abyssi MT1.1Ten
dc.subjectdermacozinesen
dc.subjectgenome sequencingen
dc.subjectbiosynthetic gene clustersen
dc.subjectDermacozinesen
dc.subjectGenome sequencingen
dc.subjectBiosynthetic gene clustersen
dc.subjectDermacoccus abyssi MT1.1en
dc.subjectDermacoccus abyssi MT1en
dc.subjectCOLD SHOCKen
dc.subjectBACTERIAen
dc.subjectSP NOV.en
dc.subjectGENESen
dc.subjectSHEWANELLA-VIOLACEAen
dc.subject1(T)en
dc.subjectSTRAINen
dc.subjectDERMACOZINESen
dc.subjectQD Chemistryen
dc.subjectDrug Discoveryen
dc.subjectSupplementary Dataen
dc.subject.lccQDen
dc.titleWhole Genome Sequence of Dermacoccus abyssi MT1.1 Isolated from the Challenger Deep of the Mariana Trench Reveals Phenazine Biosynthesis Locus and Environmental Adaptation Factorsen
dc.typeJournal articleen

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