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Target capture sequencing for phylogenomic and population studies in the Southeast Asian genus Palaquium (Sapotaceae)

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dc.contributor.authorPhang, Aireen Suet Lin
dc.contributor.authorPezzini, Flávia Fonseca
dc.contributor.authorBurslem, David
dc.contributor.authorKhew, Gillian S W
dc.contributor.authorKhew, Gillian S W
dc.contributor.authorMiddleton, David John
dc.contributor.authorRuhsam, Markus
dc.contributor.authorWilkie, P.
dc.contributor.institutionUniversity of Aberdeen.Biological Sciencesen
dc.contributor.institutionUniversity of Aberdeen.Vice Principalsen
dc.contributor.institutionUniversity of Aberdeen.Environment and Food Securityen
dc.date.accessioned2023-10-04T14:18:00Z
dc.date.available2023-10-04T14:18:00Z
dc.date.issued2023-10
dc.descriptionACKNOWLEDGEMENTS We thank the management of the National Parks Board and Singapore Botanic Gardens for providing continuous support, facilities and fieldwork approval in Singapore’s nature reserves. We appreciate the digital research team at the University of Aberdeen and the research/scientific computing teams at The James Hutton Institute and NIAB for providing technical support while using the computational resources on the respective HPC clusters, “Maxwell” and the “UK Crop Diversity Bioformatics HPC” (BBSRC grant BB/S019669/1), which have contributed to the results within this paper. We thank numerous staff at the Singapore Botanic Gardens, particularly Khoo-Woon Mui Hwang and Neo Wei Ling for strong technical support in the molecular lab, Matti Niissalo for generous sharing of lab protocols and bioinformatics tips, Choo Le Min for patient help with lab troubleshooting, Chong Kwek Yan and Chan Pin Jia for forest survey expertise, and Louise Neo for thoughtful field and R advice. Our sincere thanks are due to Herbarium staff at the Royal Botanic Garden Edinburgh, including Lesley Scott, for efficient assistance in sending silica-dried samples to the Singapore Botanic Gardens. We also thank Camille Christe at the Conservatoire et Jardin botaniques de la Ville de Genève for kind advice related to the taxon-specific baits’ setup and purchase FUNDING We are grateful to the Lady Yuen Peng McNeice Charitable Foundation for financial support of this study.en
dc.description.statusPeer revieweden
dc.format.extent14
dc.format.extent2668397
dc.identifier246103321
dc.identifier7bfbf2fe-773b-41d5-8ff4-a019d460c409
dc.identifier85188359087
dc.identifier.citationPhang, A S L, Pezzini, F F, Burslem, D, Khew, G S W, Khew, G S W, Middleton, D J, Ruhsam, M & Wilkie, P 2023, 'Target capture sequencing for phylogenomic and population studies in the Southeast Asian genus Palaquium (Sapotaceae)', Botanical Journal of the Linnean Society, vol. 203, no. 2, pp. 134-147. https://doi.org/10.1093/botlinnean/boad022en
dc.identifier.doi10.1093/botlinnean/boad022
dc.identifier.iss2en
dc.identifier.issn0024-4074
dc.identifier.otherORCID: /0000-0001-6033-0990/work/138534928
dc.identifier.urihttps://hdl.handle.net/2164/21832
dc.identifier.vol203en
dc.language.isoeng
dc.relation.ispartofBotanical Journal of the Linnean Societyen
dc.subjectMolecular systematicsen
dc.subjectPalaquiumen
dc.subjectPopulation genomicsen
dc.subjectSapotaceaeen
dc.subjectSoutheast Asiaen
dc.subjecttarget captureen
dc.subjectQH301 Biologyen
dc.subjectBiotechnology and Biological Sciences Research Council (BBSRC)en
dc.subjectBB/S019669/1en
dc.subject.lccQH301en
dc.titleTarget capture sequencing for phylogenomic and population studies in the Southeast Asian genus Palaquium (Sapotaceae)en
dc.typeJournal articleen

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