Robertson, Fiona MGundappa, Manu KumarGrammes, FabianHvidsten, Torgeir R.Redmond, AnthonyLien, SigbjornHolland, Peter W.H.Martin, Samuel A. M.Sandve, Simen R.MacQueen, Daniel J.2017-06-262017-06-262017-06-14Robertson, F M, Gundappa, M K, Grammes, F, Hvidsten, T R, Redmond, A, Lien, S, Holland, P W H, Martin, S A M, Sandve, S R & MacQueen, D J 2017, 'Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification', Genome Biology, vol. 18, 111. https://doi.org/10.1186/s13059-017-1241-z1474-760XORCID: /0000-0003-0289-6317/work/154626908http://hdl.handle.net/2164/8868Funding The study was funded by a Natural Environment Research Council (NERC) grant (NBAF704). FMR is funded by a NERC Doctoral Training Grant (NE/L50175X/1). MKG is funded by an Elphinstone PhD Scholarship from the University of Aberdeen, with additional financial support from a scholarship from the Government of Karnataka, India. Availability of data and materials Illumina sequence reads for the sequence capture study were deposited in NCBI (Bioproject PRJNA325617). All sequence alignments and phylogenetic trees used for phylogenomics are provided in Additional file 2 . Illumina sequence reads for the tissue expression study performed under controlled conditions can be found in the NCBI SRA database (accessions SRX608594, SRS64003, SRS640030, SRS640015, SRS640003, SRS639997, SRS639041, SRS640021, SRS639990l, SRS639861, SRS640009, SRS639992, SRS639037, SRS640002, SRS639994). Illumina sequence reads for the fresh to saltwater transition experiment were deposited in the European Nucleotide Archive (accession number SRP095919).142440179engwhole genome duplicationrediploidizationspecies radiationLineage-specific Ohnologue Resolution (LORe)duplicate genesfunctional divergenceautotetraploidizationsalmonid fishQH301 BiologyNatural Environment Research Council (NERC)NE/L50175X/1NBAF704Supplementary DataQH301Journal article10.1186/s13059-017-1241-z18